Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
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ID History
- Gene history

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Gene: Rpl39 ENSRNOG00000043348

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Description

ribosomal protein L39 [Source:RGD Symbol;Acc:3593]

Gene Synonyms

LOC103690821, LOC103692831, Rpl31l13, Rpl31l5

Location

Primary_assembly X: 121,192,779-121,195,879 reverse strand.

GRCr8:CM070411.1

About this gene

This gene has 2 transcripts (splice variants), 83 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000092456.3	Rpl39-201	493	73aa	ENSRNOP00000075910.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2RBV8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000137267.1	Rpl39-202	481	51aa	ENSRNOP00000103559.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JMH4	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data