Gene: Xrn1 ENSRNOG00000042951

Description

5'-3' exoribonuclease 1 [Source:RGD Symbol;Acc:1309713]

Gene Synonyms

LOC100911537, LOC300944, RGD1309713

Location

GRCr8:CM070398.1

About this gene

This gene has 3 transcripts (splice variants), 219 orthologues, 1 paralogue and is associated with 3 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000014481.10	Xrn1-201	5512	1719aa	ENSRNOP00000014481.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4ABN8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000123839.1	Xrn1-203	5349	1685aa	ENSRNOP00000109150.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000102470.2	Xrn1-202	3047	969aa	ENSRNOP00000077966.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5XWP1	-

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.