Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
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Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Mycbpap ENSRNOG00000042912

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Description

Mycbp associated protein [Source:RGD Symbol;Acc:1359123]

Gene Synonyms

COD106

Location

Primary_assembly 10: 79,947,200-79,967,918 reverse strand.

GRCr8:CM070400.1

About this gene

This gene has 5 transcripts (splice variants), 182 orthologues, 5 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000125400.1	Mycbpap-205	3619	1032aa	ENSRNOP00000107004.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000086261.3	Mycbpap-203	3346	1023aa	ENSRNOP00000071847.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K1H9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000075795.5	Mycbpap-202	3169	964aa	ENSRNOP00000067004.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0RBQ9	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000066132.5	Mycbpap-201	2980	940aa	ENSRNOP00000062686.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LPD4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000110487.2	Mycbpap-204	1522	415aa	ENSRNOP00000078077.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5XWS6	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data