Gene: Vti1a ENSRNOG00000042786

Description

vesicle transport through interaction with t-SNAREs 1A [Source:RGD Symbol;Acc:621490]

Gene Synonyms

DD6A4-2(1), Vti1, Vti1-pending

Location

GRCr8:CM070391.1

About this gene

This gene has 5 transcripts (splice variants), 198 orthologues, 2 paralogues and is associated with 3 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000139987.1	Vti1a-204	4247	224aa	ENSRNOP00000101418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JHZ6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000108016.2	Vti1a-203	2753	208aa	ENSRNOP00000083070.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9JI51-2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000147737.1	Vti1a-205	1972	197aa	ENSRNOP00000103565.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000067460.6	Vti1a-202	995	205aa	ENSRNOP00000058953.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LT41	-
ENSRNOT00000066236.5	Vti1a-201	971	197aa	ENSRNOP00000061050.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1M938	-

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.