Gene: Vsx1 ENSRNOG00000042220

Description

visual system homeobox 1 [Source:RGD Symbol;Acc:1305667]

Gene Synonyms

LOC366228, LOC689704, Vsx1_predicted

Location

GRCr8:CM070393.1

About this gene

This gene has 1 transcript (splice variant), 174 orthologues and is associated with 13 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000061469.4	Vsx1-201	2814	369aa	ENSRNOP00000058189.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6KHF7 D3ZQZ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.