Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Tlr1 ENSRNOG00000038722

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Description

toll-like receptor 1 [Source:RGD Symbol;Acc:1309975]

Gene Synonyms

LOC305354

Location

Primary_assembly 14: 43,740,379-43,756,243 forward strand.

GRCr8:CM070404.1

About this gene

This gene has 3 transcripts (splice variants), 76 orthologues, 26 paralogues and is associated with 14 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000112411.2	Tlr1-203	5419	808aa	ENSRNOP00000097749.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PTL5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000101868.2	Tlr1-202	3034	808aa	ENSRNOP00000079338.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PTL5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000059124.5	Tlr1-201	2729	808aa	ENSRNOP00000055898.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PTL5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data