Gene: Xirp1 ENSRNOG00000037085

Description

xin actin-binding repeat containing 1 [Source:RGD Symbol;Acc:1304776]

Gene Synonyms

Cmya1, LOC100910104, LOC316071

Location

Primary_assembly 8: 128,611,641-128,653,565 reverse strand.

GRCr8:CM070398.1

About this gene

This gene has 5 transcripts (splice variants), 172 orthologues, 1 paralogue and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000155827.1	Xirp1-205	18039	1822aa	ENSRNOP00000111235.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000123456.1	Xirp1-204	8932	1822aa	ENSRNOP00000109043.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000093872.2	Xirp1-202	8192	1822aa	ENSRNOP00000077004.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5YBK9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000101246.2	Xirp1-203	7040	1822aa	ENSRNOP00000091019.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5YBK9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000055888.5	Xirp1-201	4606	1127aa	ENSRNOP00000052739.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4ABA9	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,