Gene: Itgax ENSRNOG00000036703

Description

integrin subunit alpha X [Source:RGD Symbol;Acc:1561123]

Gene Synonyms

LOC499271, RGD1561123

Location

GRCr8:CM070391.1

About this gene

This gene has 2 transcripts (splice variants), 321 orthologues, 17 paralogues and is associated with 2 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000099518.2	Itgax-202	4707	1182aa	ENSRNOP00000083288.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZWP3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000054983.6	Itgax-201	4447	1125aa	ENSRNOP00000051866.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZWZ1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.