Summary
- Splice variants
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- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
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Phenotypes
Genetic Variation
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- Structural variants
Gene expression
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- Gene history

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Gene: Ybx1-ps20 ENSRNOG00000032902

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Description

Y box binding protein 1, pseudogene 20 [Source:RGD Symbol;Acc:1590933]

Gene Synonyms

Ybx1-ps3

Location

Primary_assembly 10: 39,661,899-39,663,487 reverse strand.

GRCr8:CM070400.1

About this gene

This gene has 1 transcript (splice variant), 169 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000050213.5	Ybx1-ps20-201	1559	312aa	ENSRNOP00000048698.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZEV0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data