Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
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ID History
- Gene history

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Gene: Zfp108 ENSRNOG00000032625

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Description

zinc finger protein 108 [Source:RGD Symbol;Acc:1564214]

Gene Synonyms

AC118165.1, LOC102548503, LOC499093, RGD1564214

Location

Primary_assembly 1: 88,929,416-88,957,835 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 5 transcripts (splice variants), 62 orthologues and 56 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000098218.2	Zfp108-203	3225	726aa	ENSRNOP00000080602.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZTE2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000156155.1	Zfp108-205	6230	622aa	ENSRNOP00000106179.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000026088.7	Zfp108-201	3613	714aa	ENSRNOP00000026088.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4ADN7	-
ENSRNOT00000099999.2	Zfp108-204	3589	672aa	ENSRNOP00000090073.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GIL0 A6J8X3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000094997.2	Zfp108-202	3424	700aa	ENSRNOP00000091760.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AF39	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data