Gene: Ttc28 ENSRNOG00000032590

Description

tetratricopeptide repeat domain 28 [Source:RGD Symbol;Acc:1594541]

Gene Synonyms

LOC304558

Location

Primary_assembly 12: 51,005,089-51,443,531 reverse strand.

GRCr8:CM070402.1

About this gene

This gene has 8 transcripts (splice variants), 261 orthologues, 5 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000112932.2	Ttc28-206	8625	2474aa	ENSRNOP00000081684.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZTF5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000097048.2	Ttc28-203	8628	2443aa	ENSRNOP00000081388.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZRJ0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000046920.7	Ttc28-201	8220	2339aa	ENSRNOP00000044499.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZXP1	-
ENSRNOT00000096108.2	Ttc28-202	8182	2358aa	ENSRNOP00000076352.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5YBH2	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000124936.1	Ttc28-207	8144	2380aa	ENSRNOP00000104010.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000099368.2	Ttc28-204	8125	2284aa	ENSRNOP00000094394.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AM19	-
ENSRNOT00000141591.1	Ttc28-208	8064	2287aa	ENSRNOP00000107035.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000104265.2	Ttc28-205	8015	2337aa	ENSRNOP00000097208.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ASI5	-