Summary
- Splice variants
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Comparative Genomics
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Genetic Variation
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Gene: C16h8orf48 ENSRNOG00000032376

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Description

similar to human chromosome 8 open reading frame 48 [Source:RGD Symbol;Acc:1585243]

Gene Synonyms

LOC688765

Location

Primary_assembly 16: 61,879,158-61,971,067 reverse strand.

GRCr8:CM070406.1

About this gene

This gene has 6 transcripts (splice variants) and 66 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000147987.1	C16h8orf48-204	9685	292aa	ENSRNOP00000106931.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IVJ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000165952.1	C16h8orf48-206	8955	292aa	ENSRNOP00000110409.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IVJ5	-
ENSRNOT00000161167.1	C16h8orf48-205	3324	292aa	ENSRNOP00000100147.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IVJ5	-
ENSRNOT00000127545.1	C16h8orf48-203	2900	292aa	ENSRNOP00000111497.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IVJ5	-
ENSRNOT00000117434.2	C16h8orf48-202	2780	292aa	ENSRNOP00000076719.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5XVC1 A6IVJ5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000042908.6	C16h8orf48-201	1683	292aa	ENSRNOP00000088270.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5XVC1 A6IVJ5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data