Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Slco1a6 ENSRNOG00000030894

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Description

solute carrier organic anion transporter family, member 1a6 [Source:RGD Symbol;Acc:69304]

Gene Synonyms

OATP-5, Oatp5, Slc21a13

Location

Primary_assembly 4: 176,803,226-176,839,032 reverse strand.

GRCr8:CM070394.1

About this gene

This gene has 2 transcripts (splice variants), 137 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000048367.4	Slco1a6-201	2478	670aa	ENSRNOP00000039792.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2ULI3 A6IMS9 Q9QYE2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000051461.7	Slco1a6-202	2460	664aa	ENSRNOP00000050159.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2UMB7	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data