Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Gene expression
Pathway
Molecular interactions
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Gene: Defa5 ENSRNOG00000030093

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Description

defensin alpha 5 [Source:RGD Symbol;Acc:727951]

Gene Synonyms

Defa, LOC286995

Location

Primary_assembly 16: 77,044,994-77,047,318 reverse strand.

GRCr8:CM070406.1

About this gene

This gene has 1 transcript (splice variant), 190 orthologues, 11 paralogues and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000018501.5	Defa5-201	505	94aa	ENSRNOP00000018501.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IW96 Q62715	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data