Gene: Vamp3 ENSRNOG00000030055

Description

vesicle-associated membrane protein 3 [Source:RGD Symbol;Acc:61880]

Gene Synonyms

CEB, MGC108618, VAMP-3

Location

Primary_assembly 5: 166,780,929-166,791,549 reverse strand.

GRCr8:CM070395.1

About this gene

This gene has 3 transcripts (splice variants), 203 orthologues, 11 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000051554.6	Vamp3-201	1756	145aa	ENSRNOP00000048364.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZTR0 A0A8L2QPJ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000146635.1	Vamp3-203	1442	119aa	ENSRNOP00000103069.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000110400.2	Vamp3-202	1364	120aa	ENSRNOP00000083016.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZZ29	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,