Summary
- Splice variants
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- Gene alleles
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Genetic Variation
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Gene: Zfp654 ENSRNOG00000029956

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Description

zinc finger protein 654 [Source:RGD Symbol;Acc:1308321]

Gene Synonyms

AABR07033023.1, LOC288354, LOC679644, RGD1308321, Znf654

Location

Primary_assembly 11: 15,949,373-16,011,969 reverse strand.

GRCr8:CM070401.1

About this gene

This gene has 2 transcripts (splice variants), 257 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000050533.5	Zfp654-201	4557	1118aa	ENSRNOP00000039110.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZMK5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000118668.2	Zfp654-202	4599	1042aa	ENSRNOP00000081202.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZUK3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data