Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Gypc ENSRNOG00000029939

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Description

glycophorin C [Source:RGD Symbol;Acc:1310295]

Gene Synonyms

GPC, LOC364837, MGC124900

Location

Primary_assembly 18: 24,434,922-24,440,053 reverse strand.

GRCr8:CM070408.1

About this gene

This gene has 2 transcripts (splice variants), 137 orthologues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000111877.2	Gypc-202	1995	100aa	ENSRNOP00000086068.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A530	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000046369.5	Gypc-201	1976	92aa	ENSRNOP00000049537.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZMD3 Q6XFR6	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data