Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Prtn3 ENSRNOG00000029814

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Description

proteinase 3 [Source:RGD Symbol;Acc:1304898]

Gene Synonyms

LOC314615

Location

Primary_assembly 7: 10,472,755-10,482,474 reverse strand.

GRCr8:CM070397.1

About this gene

This gene has 4 transcripts (splice variants), 78 orthologues, 4 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000101903.2	Prtn3-202	1659	422aa	ENSRNOP00000097376.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ARE6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000146028.1	Prtn3-203	1396	254aa	ENSRNOP00000109925.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000174131.1	Prtn3-204	1095	234aa	ENSRNOP00000111169.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000014687.7	Prtn3-201	967	256aa	ENSRNOP00000014687.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6K8V9 F7FNG0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data