Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
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ID History
- Gene history

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Gene: Zfp780b ENSRNOG00000029805

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Description

zinc finger protein 780B [Source:RGD Symbol;Acc:1592570]

Gene Synonyms

AABR07002774.4, LOC102554136, LOC685578

Location

Primary_assembly 1: 92,288,004-92,323,452 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 4 transcripts (splice variants), 112 orthologues and 31 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000063839.5	Zfp780b-203	4168	835aa	ENSRNOP00000062020.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZMF7 D3ZA43	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000132605.1	Zfp780b-205	17011	680aa	ENSRNOP00000105722.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000157197.1	Zfp780b-206	11721	680aa	ENSRNOP00000110471.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000102346.2	Zfp780b-204	7749	680aa	ENSRNOP00000083598.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GAY4	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data