Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Robo2 ENSRNOG00000029598

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Description

roundabout guidance receptor 2 [Source:RGD Symbol;Acc:620167]

Location

Primary_assembly 11: 26,015,919-26,876,185 reverse strand.

GRCr8:CM070401.1

About this gene

This gene has 6 transcripts (splice variants), 270 orthologues, 35 paralogues and is associated with 13 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000120651.2	Robo2-205	8843	1554aa	ENSRNOP00000098284.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000065748.5	Robo2-201	8783	1533aa	ENSRNOP00000061003.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1M950	-
ENSRNOT00000120652.2	Robo2-206	8726	1514aa	ENSRNOP00000098285.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000099822.2	Robo2-204	8510	1442aa	ENSRNOP00000089188.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AKD6	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000088878.3	Robo2-202	8381	1386aa	ENSRNOP00000070966.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JZA1	-
ENSRNOT00000090497.3	Robo2-203	8113	1376aa	ENSRNOP00000084650.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A1P7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data