Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Cubn ENSRNOG00000029047

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Description

cubilin [Source:RGD Symbol;Acc:68355]

Gene Synonyms

GP280, IFCR, MGA1

Location

Primary_assembly 17: 81,293,619-81,501,694 reverse strand.

GRCr8:CM070407.1

About this gene

This gene has 3 transcripts (splice variants), 203 orthologues, 36 paralogues and is associated with 15 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000090064.3	Cubn-202	11331	3623aa	ENSRNOP00000075097.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K9R4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000040052.6	Cubn-201	11262	3600aa	ENSRNOP00000048477.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LNU2	-
ENSRNOT00000149856.1	Cubn-203	11184	3574aa	ENSRNOP00000106447.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data