Gene: Brpf3 ENSRNOG00000028641

Description

bromodomain and PHD finger containing, 3 [Source:RGD Symbol;Acc:1306868]

Gene Synonyms

LOC309647

Location

Primary_assembly 20: 6,867,635-6,904,456 forward strand.

GRCr8:CM070410.1

About this gene

This gene has 5 transcripts (splice variants), 288 orthologues, 8 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000112955.2	Brpf3-205	6180	1328aa	ENSRNOP00000088316.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AAK8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000042143.6	Brpf3-201	5638	1165aa	ENSRNOP00000041680.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZMD3	-
ENSRNOT00000097855.2	Brpf3-203	4945	934aa	ENSRNOP00000094497.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AL41	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000109033.2	Brpf3-204	4753	870aa	ENSRNOP00000079349.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZMM1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000092629.3	Brpf3-202	3464	1100aa	ENSRNOP00000075843.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0U1RRW8	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,