Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

.

Gene: Zfp518b ENSRNOG00000028534

.

Description

zinc finger protein 518B [Source:RGD Symbol;Acc:1564150]

Gene Synonyms

LOC498390, RGD1564150

Location

Primary_assembly 14: 76,317,951-76,354,513 forward strand.

GRCr8:CM070404.1

About this gene

This gene has 6 transcripts (splice variants), 172 orthologues and 23 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000157678.1	Zfp518b-205	9856	1077aa	ENSRNOP00000099511.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IJS9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000168325.1	Zfp518b-206	9197	1077aa	ENSRNOP00000100716.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IJS9	-
ENSRNOT00000106470.2	Zfp518b-204	8871	1077aa	ENSRNOP00000097304.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IJS9 D4ABC6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000100507.2	Zfp518b-203	8373	1077aa	ENSRNOP00000084723.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IJS9 D4ABC6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000098331.2	Zfp518b-202	8264	1077aa	ENSRNOP00000082702.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IJS9 D4ABC6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000037291.8	Zfp518b-201	7827	1077aa	ENSRNOP00000038432.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IJS9 D4ABC6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Strains

.

Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

.

Personal Data