Gene: Smarcb1 ENSRNOG00000028302

Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 [Source:RGD Symbol;Acc:1308761]

Gene Synonyms

LOC103694876, LOC361825, MGC116367

Location

Primary_assembly 20: 12,740,943-12,763,055 forward strand.

GRCr8:CM070410.1

About this gene

This gene has 3 transcripts (splice variants), 267 orthologues and is associated with 31 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000171447.1	Smarcb1-203	1629	408aa	ENSRNOP00000100193.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000029458.8	Smarcb1-201	1637	385aa	ENSRNOP00000034916.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8J8YH81 A6JKF4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000111650.2	Smarcb1-202	1584	368aa	ENSRNOP00000097025.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AVW5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,