Gene: Txndc2 ENSRNOG00000027916

Description

thioredoxin domain containing 2 [Source:RGD Symbol;Acc:1359251]

Gene Synonyms

MGC94320

Location

Primary_assembly 9: 112,668,084-112,682,092 reverse strand.

GRCr8:CM070399.1

About this gene

This gene has 4 transcripts (splice variants), 74 orthologues, 4 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000032330.7	Txndc2-201	1865	558aa	ENSRNOP00000034030.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5XHX6-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000097957.2	Txndc2-203	2668	502aa	ENSRNOP00000092660.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LV53	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000065073.5	Txndc2-202	2562	514aa	ENSRNOP00000062071.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5XHX6-2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000172171.1	Txndc2-204	2399	536aa	ENSRNOP00000102385.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: Txndc2 ENSRNOG00000027916

Strains

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Gene: Txndc2 ENSRNOG00000027916

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