Gene: Afg3l1 ENSRNOG00000026994

Description

AFG3 (ATPase family gene 3)-like 1 [Source:RGD Symbol;Acc:1309722]

Gene Synonyms

LOC361436

Location

Primary_assembly 19: 68,417,082-68,446,039 forward strand.

GRCr8:CM070409.1

About this gene

This gene has 4 transcripts (splice variants), 226 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000097117.2	Afg3l1-202	4314	807aa	ENSRNOP00000096995.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GMC1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000171726.1	Afg3l1-204	4369	759aa	ENSRNOP00000105074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000101653.2	Afg3l1-203	4224	763aa	ENSRNOP00000079059.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZQ14	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000030399.8	Afg3l1-201	2432	737aa	ENSRNOP00000037053.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZZ20	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: Afg3l1 ENSRNOG00000026994

Strains

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Gene: Afg3l1 ENSRNOG00000026994

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