Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Nup188 ENSRNOG00000025185

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Description

nucleoporin 188 [Source:RGD Symbol;Acc:1306022]

Gene Synonyms

LOC100911302, LOC366016

Location

Primary_assembly 3: 33,957,791-34,014,122 forward strand.

GRCr8:CM070393.1

About this gene

This gene has 3 transcripts (splice variants), 203 orthologues and is associated with 10 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000030996.8	Nup188-201	5651	1754aa	ENSRNOP00000032298.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LRC6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000099170.2	Nup188-202	5712	1749aa	ENSRNOP00000084918.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GC98	-
ENSRNOT00000102741.2	Nup188-203	497	152aa	ENSRNOP00000077884.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y6G4	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data