Gene: Spindoc ENSRNOG00000025061

Description

spindlin interactor and repressor of chromatin binding [Source:RGD Symbol;Acc:1308106]

Gene Synonyms

RGD1308106

Location

GRCr8:CM070391.1

About this gene

This gene has 2 transcripts (splice variants), 92 orthologues and is associated with 2 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000083157.3	Spindoc-202	1916	382aa	ENSRNOP00000075651.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2KB48	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000034477.8	Spindoc-201	1815	346aa	ENSRNOP00000029940.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4AED1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.