Summary
- Splice variants
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Comparative Genomics
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Phenotypes
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Gene: Nudcd1 ENSRNOG00000024929

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Description

NudC domain containing 1 [Source:RGD Symbol;Acc:1310624]

Gene Synonyms

LOC362906, RGD1310624

Location

Primary_assembly 7: 77,436,036-77,480,575 reverse strand.

GRCr8:CM070397.1

About this gene

This gene has 2 transcripts (splice variants), 208 orthologues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000102595.2	Nudcd1-202	2132	580aa	ENSRNOP00000091595.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AGF4 A0A9K3Y8F7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000006685.7	Nudcd1-201	2124	533aa	ENSRNOP00000006685.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5DFD1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data