Gene: Tnrc18 ENSRNOG00000024482

Description

trinucleotide repeat containing 18 [Source:RGD Symbol;Acc:1307540]

Gene Synonyms

LOC304302, Zfp469

Location

Primary_assembly 12: 16,868,978-16,965,217 forward strand.

GRCr8:CM070402.1

About this gene

This gene has 4 transcripts (splice variants), 187 orthologues, 2 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000117077.2	Tnrc18-204	10384	2952aa	ENSRNOP00000093862.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AKW0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000038203.8	Tnrc18-201	10614	2900aa	ENSRNOP00000034125.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZKV7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000098287.2	Tnrc18-203	10485	2857aa	ENSRNOP00000086100.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A586	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000084865.3	Tnrc18-202	8257	2685aa	ENSRNOP00000072189.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K2C6	-

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: Tnrc18 ENSRNOG00000024482

Strains

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Gene: Tnrc18 ENSRNOG00000024482

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