Gene: Traf3ip1 ENSRNOG00000024468

Description

TRAF3 interacting protein 1 [Source:RGD Symbol;Acc:1309252]

Gene Synonyms

LOC363286, MIP-T3

Location

Primary_assembly 9: 99,521,179-99,557,963 forward strand.

GRCr8:CM070399.1

About this gene

This gene has 5 transcripts (splice variants), 198 orthologues and is associated with 10 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000081992.3	Traf3ip1-202	3790	687aa	ENSRNOP00000069939.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JWM5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000104108.2	Traf3ip1-204	3679	653aa	ENSRNOP00000076695.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZJ93	-
ENSRNOT00000100401.2	Traf3ip1-203	3604	621aa	ENSRNOP00000085077.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZYG8	-
ENSRNOT00000113396.2	Traf3ip1-205	3532	600aa	ENSRNOP00000076805.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y0E3	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000056612.5	Traf3ip1-201	2237	677aa	ENSRNOP00000053451.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5XIN3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,