Gene: Rbm42 ENSRNOG00000024278

Description

RNA binding motif protein 42 [Source:RGD Symbol;Acc:1306184]

Gene Synonyms

LOC361545, RGD1306184

Location

GRCr8:CM070391.1

About this gene

This gene has 2 transcripts (splice variants), 104 orthologues and is associated with 3 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000031254.5	Rbm42-201	1664	478aa	ENSRNOP00000029729.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AXT7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000087437.3	Rbm42-202	1598	456aa	ENSRNOP00000070333.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JXM6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.