Gene: Sprr1a ENSRNOG00000024028

Description

small proline-rich protein 1A [Source:RGD Symbol;Acc:1593163]

Gene Synonyms

LOC499660, Spr, Spr1a, Sprr, Sprr1, Sprr1al, Sprr1b

Location

Primary_assembly 2: 180,750,709-180,752,991 reverse strand.

GRCr8:CM070392.1

About this gene

This gene has 3 transcripts (splice variants), 40 orthologues, 13 paralogues and is associated with 8 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000133585.1	Sprr1a-203	1178	152aa	ENSRNOP00000099552.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6KMQ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000112402.2	Sprr1a-202	1146	144aa	ENSRNOP00000078391.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZKS9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000012174.9	Sprr1a-201	824	152aa	ENSRNOP00000012174.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6KMQ5 G3V755	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,