Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Gata6 ENSRNOG00000023433

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Description

GATA binding protein 6 [Source:RGD Symbol;Acc:2666]

Location

Primary_assembly 18: 2,458,253-2,492,322 forward strand.

GRCr8:CM070408.1

About this gene

This gene has 3 transcripts (splice variants), 190 orthologues, 7 paralogues and is associated with 28 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000133399.1	Gata6-203	3490	714aa	ENSRNOP00000099345.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000129769.1	Gata6-202	3280	644aa	ENSRNOP00000100572.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000081399.3	Gata6-201	3044	587aa	ENSRNOP00000070439.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JXX6 P46153	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data