Gene: Scx ENSRNOG00000021812

Description

scleraxis bHLH transcription factor [Source:RGD Symbol;Acc:1588254]

Gene Synonyms

LOC680712, MGC189419

Location

GRCr8:CM070397.1

About this gene

This gene has 2 transcripts (splice variants), 218 orthologues, 13 paralogues and is associated with 4 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000133284.1	Scx-202	6202	228aa	ENSRNOP00000102837.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5DFF0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000029768.4	Scx-201	2356	228aa	ENSRNOP00000029792.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5DFF0 G3V8X3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.