Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
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Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Gfra4 ENSRNOG00000021241

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Description

GDNF family receptor alpha 4 [Source:RGD Symbol;Acc:620503]

Location

Primary_assembly 3: 138,703,114-138,711,561 reverse strand.

GRCr8:CM070393.1

About this gene

This gene has 6 transcripts (splice variants), 258 orthologues, 4 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000148361.1	Gfra4-204	2322	373aa	ENSRNOP00000101052.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000153142.1	Gfra4-206	2114	355aa	ENSRNOP00000109532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000152461.1	Gfra4-205	1882	347aa	ENSRNOP00000109889.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000132677.1	Gfra4-203	1810	319aa	ENSRNOP00000106510.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000104014.2	Gfra4-202	1631	288aa	ENSRNOP00000095734.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AS10	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000047947.4	Gfra4-201	1603	250aa	ENSRNOP00000042875.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9EPI2-2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data