Gene: Rorc ENSRNOG00000020836

Description

RAR-related orphan receptor C [Source:RGD Symbol;Acc:1595785]

Gene Synonyms

LOC368158, MGC189525

Location

Primary_assembly 2: 184,698,818-184,724,566 forward strand.

GRCr8:CM070392.1

About this gene

This gene has 4 transcripts (splice variants), 383 orthologues, 19 paralogues and is associated with 14 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000118722.2	Rorc-204	2885	508aa	ENSRNOP00000086848.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GEH3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000101844.2	Rorc-202	3573	487aa	ENSRNOP00000079633.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZN69	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000067042.5	Rorc-201	2774	471aa	ENSRNOP00000058884.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2QC01	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000111824.2	Rorc-203	1020	339aa	ENSRNOP00000089381.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A746	-