Summary
- Splice variants
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Sequence
- Secondary Structure
Comparative Genomics
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Phenotypes
Genetic Variation
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Gene: Bnip1 ENSRNOG00000020753

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Description

BCL2 interacting protein 1 [Source:RGD Symbol;Acc:620799]

Gene Synonyms

Bnip1l1

Location

Primary_assembly 10: 16,891,317-16,903,561 reverse strand.

GRCr8:CM070400.1

About this gene

This gene has 3 transcripts (splice variants), 270 orthologues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000028173.6	Bnip1-201	1106	228aa	ENSRNOP00000028173.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QGT1 Q8VHI8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000096515.2	Bnip1-202	1062	217aa	ENSRNOP00000094010.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AJX7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000106369.2	Bnip1-203	1004	194aa	ENSRNOP00000076586.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZK41	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data