Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Actn4 ENSRNOG00000020433

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Description

actinin alpha 4 [Source:RGD Symbol;Acc:61816]

Location

Primary_assembly 1: 93,310,278-93,379,320 reverse strand.

GRCr8:CM070391.1

About this gene

This gene has 7 transcripts (splice variants), 170 orthologues, 37 paralogues and is associated with 13 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000151438.1	Actn4-206	3937	931aa	ENSRNOP00000103109.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000027773.9	Actn4-201	3877	911aa	ENSRNOP00000027773.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2UKD4 A6J9M1 Q9QXQ0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000136183.1	Actn4-204	3877	911aa	ENSRNOP00000106020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000172429.1	Actn4-207	3863	917aa	ENSRNOP00000112542.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000140892.1	Actn4-205	3862	906aa	ENSRNOP00000100770.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000089305.3	Actn4-202	3796	884aa	ENSRNOP00000071262.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K013	-
ENSRNOT00000090402.3	Actn4-203	3664	876aa	ENSRNOP00000073566.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K5U9	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data