Summary
- Splice variants
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- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Phenotypes
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Gene: Nup98 ENSRNOG00000020347

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Description

nucleoporin 98 and 96 precursor [Source:RGD Symbol;Acc:71033]

Location

Primary_assembly 1: 165,906,405-166,003,366 reverse strand.

GRCr8:CM070391.1

About this gene

This gene has 3 transcripts (splice variants), 224 orthologues and is associated with 10 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000027575.9	Nup98-201	6572	1816aa	ENSRNOP00000027575.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P49793-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000117464.2	Nup98-203	6431	1769aa	ENSRNOP00000094157.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ALK1	-
ENSRNOT00000027590.8	Nup98-202	3083	907aa	ENSRNOP00000027590.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LPQ1	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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