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Gene: Spats1 ENSRNOG00000019963

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Description

spermatogenesis associated, serine-rich 1 [Source:RGD Symbol;Acc:631367]

Gene Synonyms

Srsp1

Location

Primary_assembly 9: 23,024,609-23,059,730 forward strand.

GRCr8:CM070399.1

About this gene

This gene has 3 transcripts (splice variants) and 90 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000161580.1	Spats1-203	2078	336aa	ENSRNOP00000105654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000045763.6	Spats1-201	1210	281aa	ENSRNOP00000038995.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LSS6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000080940.3	Spats1-202	1120	278aa	ENSRNOP00000074772.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K8X4	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data