Gene: Lrrfip1 ENSRNOG00000019892

Description

LRR binding FLII interacting protein 1 [Source:RGD Symbol;Acc:1359548]

Gene Synonyms

LOC367314

Location

Primary_assembly 9: 99,039,614-99,167,779 forward strand.

GRCr8:CM070399.1

About this gene

This gene has 10 transcripts (splice variants), 234 orthologues, 1 paralogue and is associated with 7 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000153243.1	Lrrfip1-210	4408	1032aa	ENSRNOP00000112353.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000100990.2	Lrrfip1-205	4363	1017aa	ENSRNOP00000080509.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZPV3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000100450.2	Lrrfip1-203	4328	960aa	ENSRNOP00000077964.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y1S8	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000134340.1	Lrrfip1-209	4021	903aa	ENSRNOP00000112126.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000100660.2	Lrrfip1-204	3950	800aa	ENSRNOP00000076434.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y5U1	-
ENSRNOT00000112176.2	Lrrfip1-207	3791	788aa	ENSRNOP00000078450.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZL04	-
ENSRNOT00000112051.2	Lrrfip1-206	3783	793aa	ENSRNOP00000076897.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y0X7	-
ENSRNOT00000050191.4	Lrrfip1-201	3752	734aa	ENSRNOP00000045021.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QNX6	-
ENSRNOT00000095067.2	Lrrfip1-202	2941	678aa	ENSRNOP00000088829.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A6Y5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000119489.2	Lrrfip1-208	2791	628aa	ENSRNOP00000095213.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GL21 A6JQP1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,