Gene: Ntf3 ENSRNOG00000019716

Description

neurotrophin 3 [Source:RGD Symbol;Acc:619728]

Gene Synonyms

HDNF, NGF-2, NT-3

Location

Primary_assembly 4: 160,600,770-160,676,349 reverse strand.

GRCr8:CM070394.1

About this gene

This gene has 10 transcripts (splice variants), 197 orthologues, 3 paralogues and is associated with 24 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000087115.3	Ntf3-203	1462	315aa	ENSRNOP00000070420.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JXV7 A6ILV0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000149553.1	Ntf3-209	7296	258aa	ENSRNOP00000104157.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000129844.1	Ntf3-206	5539	258aa	ENSRNOP00000112115.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000140521.1	Ntf3-207	2920	258aa	ENSRNOP00000099372.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000125625.1	Ntf3-205	2530	258aa	ENSRNOP00000108981.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000142532.1	Ntf3-208	2205	258aa	ENSRNOP00000099772.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000165141.1	Ntf3-210	1669	258aa	ENSRNOP00000109458.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000026685.7	Ntf3-201	1594	258aa	ENSRNOP00000026685.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P18280	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000082009.3	Ntf3-202	1576	258aa	ENSRNOP00000069580.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JVQ7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000115703.2	Ntf3-204	1564	258aa	ENSRNOP00000090293.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P18280	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: Ntf3 ENSRNOG00000019716

Strains

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Gene: Ntf3 ENSRNOG00000019716

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