Gene: Lamp1 ENSRNOG00000019629

Description

lysosomal-associated membrane protein 1 [Source:RGD Symbol;Acc:2989]

Gene Synonyms

LAMP-1, LGP-120, LGP120

Location

Primary_assembly 16: 83,058,385-83,075,159 reverse strand.

GRCr8:CM070406.1

About this gene

This gene has 4 transcripts (splice variants), 270 orthologues, 4 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000026580.8	Lamp1-201	2090	408aa	ENSRNOP00000026580.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2UK78	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000096958.2	Lamp1-203	2087	407aa	ENSRNOP00000084480.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A235	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000092552.3	Lamp1-202	1879	404aa	ENSRNOP00000075832.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0U1RRW1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000105987.2	Lamp1-204	1879	404aa	ENSRNOP00000096531.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AQY4	-