Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
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  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
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Gene: Pmf1 ENSRNOG00000019620

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Description

polyamine-modulated factor 1 [Source:RGD Symbol;Acc:1584694]

Gene Synonyms

LOC681050

Location

Primary_assembly 2: 176,145,896-176,166,076 reverse strand.

GRCr8:CM070392.1

About this gene

This gene has 4 transcripts (splice variants), 133 orthologues and is associated with 11 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000173224.1	Pmf1-204	731	208aa	ENSRNOP00000110930.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000157058.1	Pmf1-203	1338	191aa	ENSRNOP00000108162.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000035383.7	Pmf1-201	1137	202aa	ENSRNOP00000036204.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZEH8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000092517.3	Pmf1-202	1026	133aa	ENSRNOP00000075901.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0U1RS22 A6J672	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data