Gene: Entr1l3 ENSRNOG00000018876

Description

endosome associated trafficking regulator 1 like 3 [Source:RGD Symbol;Acc:1562289]

Gene Synonyms

LOC501516, RGD1562289

Location

Primary_assembly 3: 29,599,059-29,605,898 reverse strand.

GRCr8:CM070393.1

About this gene

This gene has 4 transcripts (splice variants), 192 orthologues, 2 paralogues and is associated with 12 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000061669.6	Entr1l3-201	2333	418aa	ENSRNOP00000058381.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LMK3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000102669.2	Entr1l3-203	2242	382aa	ENSRNOP00000096122.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AUN1	-
ENSRNOT00000105263.2	Entr1l3-204	2205	409aa	ENSRNOP00000084886.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A2U5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000089705.3	Entr1l3-202	2041	359aa	ENSRNOP00000068774.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JTN0	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: Entr1l3 ENSRNOG00000018876

Strains

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Gene: Entr1l3 ENSRNOG00000018876

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