Gene: Tcerg1 ENSRNOG00000018849

Description

transcription elongation regulator 1 [Source:RGD Symbol;Acc:1311748]

Gene Synonyms

Ca150, LOC307474

Location

Primary_assembly 18: 34,756,725-34,817,441 forward strand.

GRCr8:CM070408.1

About this gene

This gene has 6 transcripts (splice variants), 202 orthologues, 2 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000127721.1	Tcerg1-205	4609	1109aa	ENSRNOP00000108739.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000025467.8	Tcerg1-201	4366	1081aa	ENSRNOP00000025467.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZTL0	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000158534.1	Tcerg1-206	4318	1065aa	ENSRNOP00000109103.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000106966.2	Tcerg1-203	4218	1015aa	ENSRNOP00000094140.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GKL3	-
ENSRNOT00000086979.3	Tcerg1-202	4157	1098aa	ENSRNOP00000073243.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5DEZ4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000116807.2	Tcerg1-204	4102	1060aa	ENSRNOP00000094971.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AM46	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,