Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Nisch ENSRNOG00000018823

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Description

nischarin [Source:RGD Symbol;Acc:1306950]

Gene Synonyms

I-1, I1R, IR1

Location

Primary_assembly 16: 6,370,809-6,407,387 reverse strand.

GRCr8:CM070406.1

About this gene

This gene has 5 transcripts (splice variants), 208 orthologues, 1 paralogue and is associated with 7 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000113930.2	Nisch-203	5931	1709aa	ENSRNOP00000080638.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZTG9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000106800.2	Nisch-202	5901	1699aa	ENSRNOP00000094287.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AMT4	-
ENSRNOT00000126908.1	Nisch-205	5847	1681aa	ENSRNOP00000110835.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000036910.7	Nisch-201	5128	1495aa	ENSRNOP00000032758.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QGU1	-
ENSRNOT00000115386.2	Nisch-204	2704	516aa	ENSRNOP00000097646.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ATD2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data