Gene: Cadm1 ENSRNOG00000018778

Description

cell adhesion molecule 1 [Source:RGD Symbol;Acc:1310999]

Gene Synonyms

Igsf4, Igsf4a, LOC363058, Necl-2, SynCAM, TSLC-1, TSLC1, sgigsf

Location

Primary_assembly 8: 56,744,372-57,080,192 forward strand.

GRCr8:CM070398.1

About this gene

This gene has 7 transcripts (splice variants), 277 orthologues, 15 paralogues and is associated with 14 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000102618.2	Cadm1-204	1813	476aa	ENSRNOP00000076752.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y709	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000115996.2	Cadm1-206	2496	431aa	ENSRNOP00000096807.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GLS0	-
ENSRNOT00000131971.1	Cadm1-207	2373	390aa	ENSRNOP00000100479.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000052392.5	Cadm1-201	2201	458aa	ENSRNOP00000041169.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5H1ZRU4 A6J485	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000110628.2	Cadm1-205	2169	447aa	ENSRNOP00000081058.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AYP5-1	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000079797.3	Cadm1-202	2112	428aa	ENSRNOP00000069217.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JUT1 A6J487	-
ENSRNOT00000097876.2	Cadm1-203	1285	361aa	ENSRNOP00000092150.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AHK7	-