Gene: Csf1r ENSRNOG00000018414

Description

colony stimulating factor 1 receptor [Source:RGD Symbol;Acc:2425]

Gene Synonyms

CSF-1-R, CSF-1R, M-CSF-R, MGC125014, c-fms, mrfms

Location

Primary_assembly 18: 56,817,049-56,860,806 forward strand.

GRCr8:CM070408.1

About this gene

This gene has 8 transcripts (splice variants), 272 orthologues, 53 paralogues and is associated with 82 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000049357.6	Csf1r-201	3698	1022aa	ENSRNOP00000040411.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4ACA7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000117928.2	Csf1r-207	3851	978aa	ENSRNOP00000085048.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZZ98 A6IXF7	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000116788.2	Csf1r-206	3692	1020aa	ENSRNOP00000090893.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AEN2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000094400.2	Csf1r-204	3617	971aa	ENSRNOP00000079769.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZP95	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000168340.1	Csf1r-208	3566	883aa	ENSRNOP00000104481.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000079360.3	Csf1r-202	3538	968aa	ENSRNOP00000075739.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2KBC4	-
ENSRNOT00000112990.2	Csf1r-205	1562	425aa	ENSRNOP00000086224.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A5F0	-
ENSRNOT00000088988.3	Csf1r-203	1353	450aa	ENSRNOP00000072826.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K3Y5	-